CDS

Accession Number TCMCG007C46206
gbkey CDS
Protein Id XP_009106382.1
Location complement(27545461..27547293)
Gene LOC103832171
GeneID 103832171
Organism Brassica rapa

Protein

Length 610aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009108134.3
Definition SNW/SKI-interacting protein [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category AB
Description SKIP/SNW domain
KEGG_TC -
KEGG_Module M00355        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K06063        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
ko04330        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
map04330        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000350        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000393        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003712        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009743        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010555        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0036002        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042752        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071014        [VIEW IN EMBL-EBI]
GO:0071141        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000028        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGTCTCTTAAGGACCGTCTACCTCCGGCCAAATCAACAGCCGCCACGTTCTACGACCACTCCAACGATCCATGGTTCAAGAACCGTTTCACCGAGTCCGAATCCGAGAAAACCGCCGCCGTGGTTTTCAAAGCGGTGCCTGTTTACCTGAAGCGTCAAGGCTTCCGTCCTAGGAACCCTGAGGATTTTGGAGACGGTGGCGCTTTCCCTGAGATACACGTTGCTCAGTATCCCCTCGGGATGGGGAAGAATAAGTCTAACAAGCCTGGGGCCAAGACGCTTCCTGTTACTGTTGATGCTCAAGGGAATGTGATGTTTGACGCTATTGTGAGGCAGAATGAGAACTCGAAGAAGATTGTTTACTCTCAGCATAAGGATATTATCCCCAAGGTGCTGAAGAACGAGGGGGGAGAGGATGGTGTTGTGGATGAAGAGGAGGAGTTGCAGAAGCAGATTCAGGAGACTACTGAGGAGACGAAAGCTGCTATGGAGAAGATTGTGAATGTGAGGCTGAGTGCTGCGCAGCCTACTAATGTCCCGAGGCAGTCAGGAGACTCGAAGTTTATTAAGTTTAAGCCTTCTCAGCAGTCTTCGGCTTTTAATTCAGGTGCTAAAGAGAGGATTATTAGGATGGTGGAGATGCCTGTGGATCCTCTTGATCCGCCGAAGTTTAAGCACAAGAGAGTCCCCAAGGCTTCTGGCTCTCCTCCTGTTCCTGTCATGCATTCGCCGCCCAGGCCTGTTACAGTCAAGGACCAGCAAGACTGGAAGATCCCTCCTTGTATCTCTAACTGGAAGAATCCGAAGGGTTACACTATCCCTCTTGATAAACGTCTTGCTGCTGATGGAAGAGGTTTACAAGATGTTCAGATTAATGATAACTTTGCCAAACTATCTGAGGCTCTCTATGTTGCTGAGCAGAAAGCTAGGGAGGCAGTTTCGATGCGGTCAAAGGTGCAAAAGGAGATGATGATGAAGGAGAAGGAAAGGAAAGAGCAGGAATTGAGGGCTCTTGCTCAAAAAGCTCGTTCTGAGAGAACTGGTGCTCCTGCGAGCATGCCTGTCTCTGTAGACAGGGCTAGGAGTGAGAGTGTTGACCCGAGAGGTGATTATGACTATGACCGTGACCGTGAGAGGGAAAGGGAAAGAGAGAGGGAAGGGCCAAAGGAGAGTAGAGAGGAGAAGGATCGGATGCGGAGGGAGGAGATCCGAAGAGAGCGTCGCCACGAAAGAGAAAGGGAGAGAAGGTTGGAAGCTAAAGATGCTGCCATGGGGAAGAAGAGCAAGATCACGAGAGACAGAGACCGTGATATCAGCGAGAAAGTCGCTCTTGGAATGGCCTCTACAGGAGGCAAAGGCGGCGAAGTTATGTACGATCAACGTCTCTTCAACCAAGAGAAGGGAATGGATTCAGGTTTCGCAACTGACGACCAGTACAACGTATACGACAAAGGCTTGTTCACTGCACAACCCACTCTCTCAACGCTCTACAAGCCTAAGAAGGATACGGATGAAGAAATGTACGGAAACGCAGACGAGCAGCTCGATAAGCTCAAGAACACCGAGAGGTTCAAACCAGACAGAGCTTTCACCGGTGCTTCCGAGAGGTCGGGCAAGAGAGAACGACCTGTGGAGTTCGAGAAGGAAGAACAAGATCCTTTCGGTCTGGACCGTTTCGTGTCTGACGTGAACAAAGGCAAGAAGAAGCCTTTGGACAAAATCGGATCTGGTGGAACTATGAGAGCAAGCGGCGGTGGCGGCAGCTCTTCACGCGATGACTATGGTGGTTCTGGTCGAACCAAGATCAATTTCGAACGTGGTGATCGTTAA
Protein:  
MASLKDRLPPAKSTAATFYDHSNDPWFKNRFTESESEKTAAVVFKAVPVYLKRQGFRPRNPEDFGDGGAFPEIHVAQYPLGMGKNKSNKPGAKTLPVTVDAQGNVMFDAIVRQNENSKKIVYSQHKDIIPKVLKNEGGEDGVVDEEEELQKQIQETTEETKAAMEKIVNVRLSAAQPTNVPRQSGDSKFIKFKPSQQSSAFNSGAKERIIRMVEMPVDPLDPPKFKHKRVPKASGSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVSMRSKVQKEMMMKEKERKEQELRALAQKARSERTGAPASMPVSVDRARSESVDPRGDYDYDRDREREREREREGPKESREEKDRMRREEIRRERRHERERERRLEAKDAAMGKKSKITRDRDRDISEKVALGMASTGGKGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYKPKKDTDEEMYGNADEQLDKLKNTERFKPDRAFTGASERSGKRERPVEFEKEEQDPFGLDRFVSDVNKGKKKPLDKIGSGGTMRASGGGGSSSRDDYGGSGRTKINFERGDR